6-deoxyerythronolide B

6-deoxyerythronolide B is a lipid of Polyketides (PK) class. The involved functions are known as Anabolism, Biosynthetic Pathways and Synthesis. The associated genes with 6-deoxyerythronolide B are LARGE gene. The related lipids are Propionate.

Cross Reference

Introduction

To understand associated biological information of 6-deoxyerythronolide B, we collected biological information of abnormalities, associated pathways, cellular/molecular locations, biological functions, related genes/proteins, lipids and common seen animal/experimental models with organized paragraphs from literatures.

What diseases are associated with 6-deoxyerythronolide B?

There are no associated biomedical information in the current reference collection.

No disease MeSH terms mapped to the current reference collection.

PubChem Associated disorders and diseases

What pathways are associated with 6-deoxyerythronolide B

Lipid pathways are not clear in current pathway databases. We organized associated pathways with 6-deoxyerythronolide B through full-text articles, including metabolic pathways or pathways of biological mechanisms.

Related references are published most in these journals:

Pathway name Related literatures
Loading... please refresh the page if content is not showing up.

PubChem Biomolecular Interactions and Pathways

Link to PubChem Biomolecular Interactions and Pathways

What cellular locations are associated with 6-deoxyerythronolide B?

There are no associated biomedical information in the current reference collection.

What functions are associated with 6-deoxyerythronolide B?


Related references are published most in these journals:

Function Cross reference Weighted score Related literatures

What lipids are associated with 6-deoxyerythronolide B?

Related references are published most in these journals:

Lipid concept Cross reference Weighted score Related literatures
Loading... please refresh the page if content is not showing up.

What genes are associated with 6-deoxyerythronolide B?

Related references are published most in these journals:


Gene Cross reference Weighted score Related literatures

What common seen animal models are associated with 6-deoxyerythronolide B?

There are no associated biomedical information in the current reference collection.

NCBI Entrez Crosslinks

All references with 6-deoxyerythronolide B

Download all related citations
Per page 10 20 50 100 | Total 73
Authors Title Published Journal PubMed Link
He Z et al. [Reconstruction of erythromycin macrocyclic lactone synthesis pathway in Escherichia coli]. 2012 Sheng Wu Gong Cheng Xue Bao pmid:22667124
Donadio S et al. Modular organization of genes required for complex polyketide biosynthesis. 1991 Science pmid:2024119
Kao CM et al. Engineered biosynthesis of a complete macrolactone in a heterologous host. 1994 Science pmid:8036492
Jacobsen JR et al. Precursor-directed biosynthesis of erythromycin analogs by an engineered polyketide synthase. 1997 Science pmid:9219693
Ferber D Microbiology. Possible new route to polyketide synthesis. 2001 Science pmid:11253181
Pfeifer BA et al. Biosynthesis of complex polyketides in a metabolically engineered strain of E. coli. 2001 Science pmid:11230695
Cupp-Vickery JR et al. Preliminary crystallographic analysis of an enzyme involved in erythromycin biosynthesis: cytochrome P450eryF. 1994 Proteins pmid:7846029
Xue Q et al. A multiplasmid approach to preparing large libraries of polyketides. 1999 Proc. Natl. Acad. Sci. U.S.A. pmid:10518520
Winn PJ et al. Comparison of the dynamics of substrate access channels in three cytochrome P450s reveals different opening mechanisms and a novel functional role for a buried arginine. 2002 Proc. Natl. Acad. Sci. U.S.A. pmid:11959989
Kapur S et al. Molecular recognition between ketosynthase and acyl carrier protein domains of the 6-deoxyerythronolide B synthase. 2010 Proc. Natl. Acad. Sci. U.S.A. pmid:21127271
Chen D et al. Identification and characterization of a new erythromycin biosynthetic gene cluster in Actinopolyspora erythraea YIM90600, a novel erythronolide-producing halophilic actinomycete isolated from salt field. 2014 PLoS ONE pmid:25250723
Paterson I and Temal-Laïb T Toward the combinatorial synthesis of polyketide libraries: asymmetric aldol reactions with alpha-chiral aldehydes on solid support. 2002 Org. Lett. pmid:12123354
Crimmins MT and Slade DJ Formal synthesis of 6-deoxyerythronolide B. 2006 Org. Lett. pmid:16671814
Pinto A et al. 6-Deoxyerythronolide B synthase thioesterase-catalyzed macrocyclization is highly stereoselective. 2012 Org. Lett. pmid:22519860
Pieper R et al. Cell-free synthesis of polyketides by recombinant erythromycin polyketide synthases. 1995 Nature pmid:7477343
Cupp-Vickery JR and Poulos TL Structure of cytochrome P450eryF involved in erythromycin biosynthesis. 1995 Nat. Struct. Biol. pmid:7749919
Akey DL et al. Structural basis for macrolactonization by the pikromycin thioesterase. 2006 Nat. Chem. Biol. pmid:16969372
Dechert-Schmitt AM et al. Polyketide construction via hydrohydroxyalkylation and related alcohol C-H functionalizations: reinventing the chemistry of carbonyl addition. 2014 Nat Prod Rep pmid:24514754
Stang EM and White MC Total synthesis and study of 6-deoxyerythronolide B by late-stage C-H oxidation. 2009 Nat Chem pmid:21378935
Gaisser S et al. Parallel pathways for oxidation of 14-membered polyketide macrolactones in Saccharopolyspora erythraea. 2002 Mol. Microbiol. pmid:11994157
Hu Z et al. A specific role of the Saccharopolyspora erythraea thioesterase II gene in the function of modular polyketide synthases. 2003 Microbiology (Reading, Engl.) pmid:12904561
Zhang H et al. Probing the heterologous metabolism supporting 6-deoxyerythronolide B biosynthesis in Escherichia coli. 2009 Microb Biotechnol pmid:21261933
Wang Y and Pfeifer BA 6-deoxyerythronolide B production through chromosomal localization of the deoxyerythronolide B synthase genes in E. coli. 2008 Metab. Eng. pmid:17959404
Wu J et al. Construction and performance of heterologous polyketide-producing K-12- and B-derived Escherichia coli. 2010 Lett. Appl. Microbiol. pmid:20565574
Khosla C Structures and mechanisms of polyketide synthases. 2009 J. Org. Chem. pmid:19711990
Keatinge-Clay A Crystal structure of the erythromycin polyketide synthase dehydratase. 2008 J. Mol. Biol. pmid:18952099
Murli S et al. Metabolic engineering of Escherichia coli for improved 6-deoxyerythronolide B production. 2003 J. Ind. Microbiol. Biotechnol. pmid:12898389
Boghigian BA et al. Simultaneous production and partitioning of heterologous polyketide and isoprenoid natural products in an Escherichia coli two-phase bioprocess. 2011 J. Ind. Microbiol. Biotechnol. pmid:21487833
Ward SL et al. Precursor-directed biosynthesis of 6-deoxyerythronolide B analogues is improved by removal of the initial catalytic sites of the polyketide synthase. 2007 J. Ind. Microbiol. Biotechnol. pmid:17033784
Carreras C et al. Saccharopolyspora erythraea-catalyzed bioconversion of 6-deoxyerythronolide B analogs for production of novel erythromycins. 2002 J. Biotechnol. pmid:11689246
Lau J et al. Development of a high cell-density fed-batch bioprocess for the heterologous production of 6-deoxyerythronolide B in Escherichia coli. 2004 J. Biotechnol. pmid:15099909
Xiang H et al. An A245T mutation conveys on cytochrome P450eryF the ability to oxidize alternative substrates. 2000 J. Biol. Chem. pmid:10956654
Ju J and Goo YM 8-Deoxylankolide from a lankamycin producing Streptomyces spp. 1997 J. Antibiot. pmid:9315083
Ashley GW and Carney JR API-mass spectrometry of polyketides. II. Fragmentation analysis of 6-deoxyerythronolide B analogs. 2004 J. Antibiot. pmid:15580959
Roddis M et al. Structural elucidation studies on 14- and 16-membered macrolide aglycones by accurate-mass electrospray sequential mass spectrometry. 2002 J. Am. Soc. Mass Spectrom. pmid:12148810
Gao X et al. Total synthesis of 6-deoxyerythronolide B via C-C bond-forming transfer hydrogenation. 2013 J. Am. Chem. Soc. pmid:23464668
Donadio S and Katz L Organization of the enzymatic domains in the multifunctional polyketide synthase involved in erythromycin formation in Saccharopolyspora erythraea. 1992 Gene pmid:1547954
Rowe CJ et al. Construction of new vectors for high-level expression in actinomycetes. 1998 Gene pmid:9714812
Chuck JA et al. Molecular recognition of diketide substrates by a beta-ketoacyl-acyl carrier protein synthase domain within a bimodular polyketide synthase. 1997 Chem. Biol. pmid:9375254
Wilkinson B et al. Novel octaketide macrolides related to 6-deoxyerythronolide B provide evidence for iterative operation of the erythromycin polyketide synthase. 2000 Chem. Biol. pmid:10662692
Leaf T et al. Precursor-directed biosynthesis of 6-deoxyerythronolide B analogs in Streptomyces coelicolor: understanding precursor effects. 2000 Jul-Aug Biotechnol. Prog. pmid:10933827
Desai RP et al. Combining classical, genetic, and process strategies for improved precursor-directed production of 6-deoxyerythronolide B analogues. 2004 Jan-Feb Biotechnol. Prog. pmid:14763821
Pistorino M and Pfeifer BA Efficient experimental design and micro-scale medium enhancement of 6-deoxyerythronolide B production through Escherichia coli. 2009 Sep-Oct Biotechnol. Prog. pmid:19634176
Lombó F et al. Enhancing the atom economy of polyketide biosynthetic processes through metabolic engineering. 2001 Jul-Aug Biotechnol. Prog. pmid:11485419
Zhang H et al. Investigating the role of native propionyl-CoA and methylmalonyl-CoA metabolism on heterologous polyketide production in Escherichia coli. 2010 Biotechnol. Bioeng. pmid:19806677
González-Lergier J et al. Analysis of the maximum theoretical yield for the synthesis of erythromycin precursors in Escherichia coli. 2006 Biotechnol. Bioeng. pmid:16619212
Boghigian BA et al. Multi-factorial engineering of heterologous polyketide production in Escherichia coli reveals complex pathway interactions. 2011 Biotechnol. Bioeng. pmid:21337322
Meng HL et al. Construction of polyketide overproducing Escherichia coli strains via synthetic antisense RNAs based on in silico fluxome analysis and comparative transcriptome analysis. 2016 Biotechnol J pmid:26709503
Ziermann R and Betlach MC Recombinant polyketide synthesis in Streptomyces: engineering of improved host strains. 1999 BioTechniques pmid:9894599
Kim C et al. The role of serine-246 in cytochrome P450eryF-catalyzed hydroxylation of 6-deoxyerythronolide B. 2001 Biosci. Biotechnol. Biochem. pmid:11388449