| MeSH term | MeSH ID | Detail |
|---|---|---|
| Melanoma | D008545 | 69 associated lipids |
Total
1
Dimethylallyl pyrophosphate
Dimethylallyl pyrophosphate is a lipid of Prenol Lipids (PR) class. Dimethylallyl pyrophosphate is associated with abnormalities such as Consumption-archaic term for TB and Wiskott-Aldrich Syndrome. The involved functions are known as Anabolism, Biochemical Pathway, Oxidation, Process and Chelating Activity [MoA]. Dimethylallyl pyrophosphate often locates in Chloroplasts, Plastids, chloroplast stroma, Cytosol and Cell membrane. The associated genes with Dimethylallyl pyrophosphate are IRF6 wt Allele and ADRBK1 gene. The related lipids are Sterols.
Cross Reference
Introduction
To understand associated biological information of Dimethylallyl pyrophosphate, we collected biological information of abnormalities, associated pathways, cellular/molecular locations, biological functions, related genes/proteins, lipids and common seen animal/experimental models with organized paragraphs from literatures.
What diseases are associated with Dimethylallyl pyrophosphate?
Dimethylallyl pyrophosphate is suspected in and other diseases in descending order of the highest number of associated sentences.
Related references are mostly published in these journals:
| Disease | Cross reference | Weighted score | Related literature |
|---|
Loading... please refresh the page if content is not showing up.
Possible diseases from mapped MeSH terms on references
We collected disease MeSH terms mapped to the references associated with Dimethylallyl pyrophosphate
PubChem Associated disorders and diseases
What pathways are associated with Dimethylallyl pyrophosphate
Lipid pathways are not clear in current pathway databases. We organized associated pathways with Dimethylallyl pyrophosphate through full-text articles, including metabolic pathways or pathways of biological mechanisms.
Related references are published most in these journals:
| Pathway name | Related literatures |
|---|
Loading... please refresh the page if content is not showing up.
PubChem Biomolecular Interactions and Pathways
Link to PubChem Biomolecular Interactions and PathwaysWhat cellular locations are associated with Dimethylallyl pyrophosphate?
Visualization in cellular structure
Associated locations are in red color. Not associated locations are in black.
Related references are published most in these journals:
| Location | Cross reference | Weighted score | Related literatures |
|---|
Loading... please refresh the page if content is not showing up.
What functions are associated with Dimethylallyl pyrophosphate?
Related references are published most in these journals:
| Function | Cross reference | Weighted score | Related literatures |
|---|
What lipids are associated with Dimethylallyl pyrophosphate?
Related references are published most in these journals:
| Lipid concept | Cross reference | Weighted score | Related literatures |
|---|
Loading... please refresh the page if content is not showing up.
What genes are associated with Dimethylallyl pyrophosphate?
Related references are published most in these journals:
| Gene | Cross reference | Weighted score | Related literatures |
|---|
What common seen animal models are associated with Dimethylallyl pyrophosphate?
There are no associated biomedical information in the current reference collection.
NCBI Entrez Crosslinks
All references with Dimethylallyl pyrophosphate
Download all related citations| Authors | Title | Published | Journal | PubMed Link |
|---|---|---|---|---|
| Nes WD | Biosynthesis of cholesterol and other sterols. | 2011 | Chem. Rev. | pmid:21902244 |
| Tijerino A et al. | Overexpression of the Trichoderma brevicompactum tri5 gene: effect on the expression of the trichodermin biosynthetic genes and on tomato seedlings. | 2011 | Toxins (Basel) | pmid:22069764 |
| Emma F et al. | Renal mitochondrial cytopathies. | 2011 | Int J Nephrol | pmid:21811680 |
| Ignea C et al. | Improving yeast strains using recyclable integration cassettes, for the production of plant terpenoids. | 2011 | Microb. Cell Fact. | pmid:21276210 |
| Artz JD et al. | Molecular characterization of a novel geranylgeranyl pyrophosphate synthase from Plasmodium parasites. | 2011 | J. Biol. Chem. | pmid:21084289 |
| Bleeker PM et al. | RNA-seq discovery, functional characterization, and comparison of sesquiterpene synthases from Solanum lycopersicum and Solanum habrochaites trichomes. | 2011 | Plant Mol. Biol. | pmid:21818683 |
| Peralta-Yahya PP et al. | Identification and microbial production of a terpene-based advanced biofuel. | 2011 | Nat Commun | pmid:21952217 |
| Du C et al. | A mutation in the UBIAD1 gene in a Han Chinese family with Schnyder corneal dystrophy. | 2011 | Mol. Vis. | pmid:22065921 |
| Sun Y et al. | Pyrosequencing of the Camptotheca acuminata transcriptome reveals putative genes involved in camptothecin biosynthesis and transport. | 2011 | BMC Genomics | pmid:22035094 |
| Xiao Y et al. | Study of IspH, a key enzyme in the methylerythritol phosphate pathway using fluoro-substituted substrate analogues. | 2011 | Org. Lett. | pmid:21981393 |
| Lu J et al. | Human ovarian tumor cells escape γδ T cell recognition partly by down regulating surface expression of MICA and limiting cell cycle related molecules. | 2011 | PLoS ONE | pmid:21935360 |
| Battilana J et al. | Functional effect of grapevine 1-deoxy-D-xylulose 5-phosphate synthase substitution K284N on Muscat flavour formation. | 2011 | J. Exp. Bot. | pmid:21868399 |
| Zeng Y et al. | A proteomic analysis of the chromoplasts isolated from sweet orange fruits [Citrus sinensis (L.) Osbeck]. | 2011 | J. Exp. Bot. | pmid:21841170 |
| Muraguchi T et al. | Polished rice as natural sources of cancer-preventing geranylgeranoic acid. | 2011 | J Clin Biochem Nutr | pmid:21765600 |
| Clastre M et al. | Subcellular evidence for the involvement of peroxisomes in plant isoprenoid biosynthesis. | 2011 | Plant Signal Behav | pmid:22080790 |
| Hao da C et al. | The first insight into the tissue specific taxus transcriptome via Illumina second generation sequencing. | 2011 | PLoS ONE | pmid:21731678 |
| Okada K | The biosynthesis of isoprenoids and the mechanisms regulating it in plants. | 2011 | Biosci. Biotechnol. Biochem. | pmid:21737944 |
| Nair SC and Striepen B | What do human parasites do with a chloroplast anyway? | 2011 | PLoS Biol. | pmid:21912515 |
| Yeh E and DeRisi JL | Chemical rescue of malaria parasites lacking an apicoplast defines organelle function in blood-stage Plasmodium falciparum. | 2011 | PLoS Biol. | pmid:21912516 |
| Nordqvist A et al. | Synthesis of functionalized cinnamaldehyde derivatives by an oxidative Heck reaction and their use as starting materials for preparation of Mycobacterium tuberculosis 1-deoxy-D-xylulose-5-phosphate reductoisomerase inhibitors. | 2011 | J. Org. Chem. | pmid:21936546 |
| Seeger K et al. | The biosynthetic genes for prenylated phenazines are located at two different chromosomal loci of Streptomyces cinnamonensis DSM 1042. | 2011 | Microb Biotechnol | pmid:21342470 |
| Meraviglia S et al. | γδ T cells cross-link innate and adaptive immunity in Mycobacterium tuberculosis infection. | 2011 | Clin. Dev. Immunol. | pmid:21253470 |
| Yu Q et al. | Plant carotene cis-trans isomerase CRTISO: a new member of the FAD(RED)-dependent flavoproteins catalyzing non-redox reactions. | 2011 | J. Biol. Chem. | pmid:21209101 |
| Schmidt A et al. | Induction of isoprenyl diphosphate synthases, plant hormones and defense signalling genes correlates with traumatic resin duct formation in Norway spruce (Picea abies). | 2011 | Plant Mol. Biol. | pmid:22002747 |
| Sui C et al. | Transcriptome analysis of Bupleurum chinense focusing on genes involved in the biosynthesis of saikosaponins. | 2011 | BMC Genomics | pmid:22047182 |
| Jang HJ et al. | Retinoid production using metabolically engineered Escherichia coli with a two-phase culture system. | 2011 | Microb. Cell Fact. | pmid:21801353 |
| Liu T and Khosla C | Chemistry. A balancing act for Taxol precursor pathways in E. coli. | 2010 | Science | pmid:20929799 |
| Ajikumar PK et al. | Isoprenoid pathway optimization for Taxol precursor overproduction in Escherichia coli. | 2010 | Science | pmid:20929806 |
| Lee M et al. | Biosynthesis of isoprenoids: crystal structure of the [4Fe-4S] cluster protein IspG. | 2010 | J. Mol. Biol. | pmid:20932974 |
| Morrone D et al. | Increasing diterpene yield with a modular metabolic engineering system in E. coli: comparison of MEV and MEP isoprenoid precursor pathway engineering. | 2010 | Appl. Microbiol. Biotechnol. | pmid:19777230 |
| Li Y et al. | EST analysis reveals putative genes involved in glycyrrhizin biosynthesis. | 2010 | BMC Genomics | pmid:20423525 |
| Takahashi S et al. | Biochemical characterization of a novel indole prenyltransferase from Streptomyces sp. SN-593. | 2010 | J. Bacteriol. | pmid:20348259 |
| Haug-Schifferdecker E et al. | A new group of aromatic prenyltransferases in fungi, catalyzing a 2,7-dihydroxynaphthalene 3-dimethylallyl-transferase reaction. | 2010 | J. Biol. Chem. | pmid:20351110 |
| Tritsch D et al. | Plant isoprenoid biosynthesis via the MEP pathway: in vivo IPP/DMAPP ratio produced by (E)-4-hydroxy-3-methylbut-2-enyl diphosphate reductase in tobacco BY-2 cell cultures. | 2010 | FEBS Lett. | pmid:19903472 |
| Köksal M et al. | Structure of isoprene synthase illuminates the chemical mechanism of teragram atmospheric carbon emission. | 2010 | J. Mol. Biol. | pmid:20624401 |
| Wang C et al. | Farnesol production from Escherichia coli by harnessing the exogenous mevalonate pathway. | 2010 | Biotechnol. Bioeng. | pmid:20552672 |
| Sharma NK et al. | Type II isopentenyl diphosphate isomerase: probing the mechanism with alkyne/allene diphosphate substrate analogues. | 2010 | Biochemistry | pmid:20560533 |
| Leonard E et al. | Combining metabolic and protein engineering of a terpenoid biosynthetic pathway for overproduction and selectivity control. | 2010 | Proc. Natl. Acad. Sci. U.S.A. | pmid:20643967 |
| Jost M et al. | Structure-function analysis of an enzymatic prenyl transfer reaction identifies a reaction chamber with modifiable specificity. | 2010 | J. Am. Chem. Soc. | pmid:21105662 |
| Trost E et al. | Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion. | 2010 | BMC Genomics | pmid:20137072 |
| Lim L and McFadden GI | The evolution, metabolism and functions of the apicoplast. | 2010 | Philos. Trans. R. Soc. Lond., B, Biol. Sci. | pmid:20124342 |
| Martin DM et al. | Functional annotation, genome organization and phylogeny of the grapevine (Vitis vinifera) terpene synthase gene family based on genome assembly, FLcDNA cloning, and enzyme assays. | 2010 | BMC Plant Biol. | pmid:20964856 |
| Behnke K et al. | RNAi-mediated suppression of isoprene emission in poplar transiently impacts phenolic metabolism under high temperature and high light intensities: a transcriptomic and metabolomic analysis. | 2010 | Plant Mol. Biol. | pmid:20526857 |
| Boghigian BA et al. | Utilizing elementary mode analysis, pathway thermodynamics, and a genetic algorithm for metabolic flux determination and optimal metabolic network design. | 2010 | BMC Syst Biol | pmid:20416071 |
| Kiran U et al. | Structural and functional characterization of HMG-COA reductase from Artemisia annua. | 2010 | Bioinformation | pmid:21364776 |
| Dunne MR et al. | Preferential Th1 cytokine profile of phosphoantigen-stimulated human Vγ9Vδ2 T cells. | 2010 | Mediators Inflamm. | pmid:21403900 |
| Sadre R et al. | Catalytic reactions of the homogentisate prenyl transferase involved in plastoquinone-9 biosynthesis. | 2010 | J. Biol. Chem. | pmid:20400515 |
| Dellas N and Noel JP | Mutation of archaeal isopentenyl phosphate kinase highlights mechanism and guides phosphorylation of additional isoprenoid monophosphates. | 2010 | ACS Chem. Biol. | pmid:20392112 |
| Chen M and Poulter CD | Characterization of thermophilic archaeal isopentenyl phosphate kinases. | 2010 | Biochemistry | pmid:19928876 |
| Hasunuma T et al. | Metabolic engineering by plastid transformation as a strategy to modulate isoprenoid yield in plants. | 2010 | Methods Mol. Biol. | pmid:20552454 |
| Yadav VR et al. | Targeting inflammatory pathways by triterpenoids for prevention and treatment of cancer. | 2010 | Toxins (Basel) | pmid:22069560 |
| George GM et al. | Virus-induced gene silencing of plastidial soluble inorganic pyrophosphatase impairs essential leaf anabolic pathways and reduces drought stress tolerance in Nicotiana benthamiana. | 2010 | Plant Physiol. | pmid:20605913 |
| Chang TH et al. | Structure of a heterotetrameric geranyl pyrophosphate synthase from mint (Mentha piperita) reveals intersubunit regulation. | 2010 | Plant Cell | pmid:20139160 |
| Goto T et al. | Various Terpenoids Derived from Herbal and Dietary Plants Function as PPAR Modulators and Regulate Carbohydrate and Lipid Metabolism. | 2010 | PPAR Res | pmid:20613991 |
| Nickerson ML et al. | UBIAD1 mutation alters a mitochondrial prenyltransferase to cause Schnyder corneal dystrophy. | 2010 | PLoS ONE | pmid:20505825 |
| Emanuelli F et al. | A candidate gene association study on muscat flavor in grapevine (Vitis vinifera L.). | 2010 | BMC Plant Biol. | pmid:21062440 |
| Kabelitz D | Human γδ T lymphocytes for immunotherapeutic strategies against cancer. | 2010 | F1000 Med Rep | pmid:20948839 |
| Kishi-Kaboshi M et al. | A rice fungal MAMP-responsive MAPK cascade regulates metabolic flow to antimicrobial metabolite synthesis. | 2010 | Plant J. | pmid:20525005 |
| Chu HM et al. | Binding and catalysis of Humulus lupulus adenylate isopentenyltransferase for the synthesis of isopentenylated diadenosine polyphosphates. | 2010 | FEBS Lett. | pmid:20807533 |
| Costa GG et al. | Transcriptome analysis of the oil-rich seed of the bioenergy crop Jatropha curcas L. | 2010 | BMC Genomics | pmid:20691070 |
| Thibodeaux CJ et al. | Linear free energy relationships demonstrate a catalytic role for the flavin mononucleotide coenzyme of the type II isopentenyl diphosphate:dimethylallyl diphosphate isomerase. | 2010 | J. Am. Chem. Soc. | pmid:20593767 |
| Andrews M et al. | The CaaX specificities of Arabidopsis protein prenyltransferases explain era1 and ggb phenotypes. | 2010 | BMC Plant Biol. | pmid:20565889 |
| Oldfield E | Targeting isoprenoid biosynthesis for drug discovery: bench to bedside. | 2010 | Acc. Chem. Res. | pmid:20560544 |
| Accardo-Palumbo A et al. | Phenotype and functional changes of Vgamma9/Vdelta2 T lymphocytes in Behçet's disease and the effect of infliximab on Vgamma9/Vdelta2 T cell expansion, activation and cytotoxicity. | 2010 | Arthritis Res. Ther. | pmid:20525258 |
| Wang H et al. | Vgamma2Vdelta2 T Cell Receptor recognition of prenyl pyrophosphates is dependent on all CDRs. | 2010 | J. Immunol. | pmid:20483784 |
| Ness-Schwickerath KJ et al. | Cytokine requirements for the differentiation and expansion of IL-17A- and IL-22-producing human Vgamma2Vdelta2 T cells. | 2010 | J. Immunol. | pmid:20483730 |
| Ohara K et al. | Two solanesyl diphosphate synthases with different subcellular localizations and their respective physiological roles in Oryza sativa. | 2010 | J. Exp. Bot. | pmid:20421194 |
| Mabanglo MF et al. | X-ray structures of isopentenyl phosphate kinase. | 2010 | ACS Chem. Biol. | pmid:20402538 |
| Aw T et al. | Functional genomics of mountain pine beetle (Dendroctonus ponderosae) midguts and fat bodies. | 2010 | BMC Genomics | pmid:20353591 |
| Kalinowska-Tłuścik J et al. | A triclinic crystal form of Escherichia coli 4-diphosphocytidyl-2C-methyl-D-erythritol kinase and reassessment of the quaternary structure. | 2010 | Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. | pmid:20208151 |
| Narayanasamy P et al. | Synthesis of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate and kinetic studies of Mycobacterium tuberculosis IspF. | 2010 | Chem. Biol. | pmid:20189102 |
| Ibrahim MA et al. | Elevation of night-time temperature increases terpenoid emissions from Betula pendula and Populus tremula. | 2010 | J. Exp. Bot. | pmid:20181662 |
| Noel JP et al. | Structural elucidation of cisoid and transoid cyclization pathways of a sesquiterpene synthase using 2-fluorofarnesyl diphosphates. | 2010 | ACS Chem. Biol. | pmid:20175559 |
| Arana L et al. | Ceramide and ceramide 1-phosphate in health and disease. | 2010 | Lipids Health Dis | pmid:20137073 |
| Schilmiller AL et al. | Studies of a biochemical factory: tomato trichome deep expressed sequence tag sequencing and proteomics. | 2010 | Plant Physiol. | pmid:20431087 |
| Connor MR and Atsumi S | Synthetic biology guides biofuel production. | 2010 | J. Biomed. Biotechnol. | pmid:20827393 |
| Cann AF and Liao JC | Pentanol isomer synthesis in engineered microorganisms. | 2010 | Appl. Microbiol. Biotechnol. | pmid:19859707 |
| Dellomonaco C et al. | The path to next generation biofuels: successes and challenges in the era of synthetic biology. | 2010 | Microb. Cell Fact. | pmid:20089184 |
| Kumano T et al. | Functional characterization of the promiscuous prenyltransferase responsible for furaquinocin biosynthesis: identification of a physiological polyketide substrate and its prenylated reaction products. | 2010 | J. Biol. Chem. | pmid:20937800 |
| Hawari AH and Mohamed-Hussein ZA | Simulation of a Petri net-based model of the terpenoid biosynthesis pathway. | 2010 | BMC Bioinformatics | pmid:20144236 |
| Gilg AB et al. | Unique animal prenyltransferase with monoterpene synthase activity. | 2009 | Naturwissenschaften | pmid:19277597 |
| Xu Q et al. | Comparative transcripts profiling reveals new insight into molecular processes regulating lycopene accumulation in a sweet orange (Citrus sinensis) red-flesh mutant. | 2009 | BMC Genomics | pmid:19922663 |
| Nieuwenhuizen NJ et al. | Two terpene synthases are responsible for the major sesquiterpenes emitted from the flowers of kiwifruit (Actinidia deliciosa). | 2009 | J. Exp. Bot. | pmid:19516075 |
| Wang W et al. | Global characterization of Artemisia annua glandular trichome transcriptome using 454 pyrosequencing. | 2009 | BMC Genomics | pmid:19818120 |
| de Souza W and Rodrigues JC | Sterol Biosynthesis Pathway as Target for Anti-trypanosomatid Drugs. | 2009 | Interdiscip Perspect Infect Dis | pmid:19680554 |
| Suzuki M et al. | Complete blockage of the mevalonate pathway results in male gametophyte lethality. | 2009 | J. Exp. Bot. | pmid:19363204 |
| Sillero MA et al. | Synthesis of ATP derivatives of compounds of the mevalonate pathway (isopentenyl di- and triphosphate; geranyl di- and triphosphate, farnesyl di- and triphosphate, and dimethylallyl diphosphate) catalyzed by T4 RNA ligase, T4 DNA ligase and other ligases Potential relationship with the effect of bisphosphonates on osteoclasts. | 2009 | Biochem. Pharmacol. | pmid:19414000 |
| Saikia S and Scott B | Functional analysis and subcellular localization of two geranylgeranyl diphosphate synthases from Penicillium paxilli. | 2009 | Mol. Genet. Genomics | pmid:19529962 |
| Rotter A et al. | Gene expression profiling in susceptible interaction of grapevine with its fungal pathogen Eutypa lata: extending MapMan ontology for grapevine. | 2009 | BMC Plant Biol. | pmid:19656401 |
| Vandermoten S et al. | New insights into short-chain prenyltransferases: structural features, evolutionary history and potential for selective inhibition. | 2009 | Cell. Mol. Life Sci. | pmid:19633972 |
| Mann FM et al. | Edaxadiene: a new bioactive diterpene from Mycobacterium tuberculosis. | 2009 | J. Am. Chem. Soc. | pmid:19583202 |
| Rubio-Aliaga I et al. | Dll1 haploinsufficiency in adult mice leads to a complex phenotype affecting metabolic and immunological processes. | 2009 | PLoS ONE | pmid:19562077 |
| Correia DV et al. | Highly active microbial phosphoantigen induces rapid yet sustained MEK/Erk- and PI-3K/Akt-mediated signal transduction in anti-tumor human gammadelta T-cells. | 2009 | PLoS ONE | pmid:19479075 |
| Vinella D et al. | Iron-sulfur (Fe/S) protein biogenesis: phylogenomic and genetic studies of A-type carriers. | 2009 | PLoS Genet. | pmid:19478995 |
| Wiberley AE et al. | Regulation of isoprene emission from poplar leaves throughout a day. | 2009 | Plant Cell Environ. | pmid:19389050 |
| Saleh O et al. | Aromatic prenylation in phenazine biosynthesis: dihydrophenazine-1-carboxylate dimethylallyltransferase from Streptomyces anulatus. | 2009 | J. Biol. Chem. | pmid:19339241 |
| Chung JA et al. | Purification of prenylated proteins by affinity chromatography on cyclodextrin-modified agarose. | 2009 | Anal. Biochem. | pmid:18834849 |
| Marks MD et al. | Identification of candidate genes affecting Delta9-tetrahydrocannabinol biosynthesis in Cannabis sativa. | 2009 | J. Exp. Bot. | pmid:19581347 |
| Alagna F et al. | Comparative 454 pyrosequencing of transcripts from two olive genotypes during fruit development. | 2009 | BMC Genomics | pmid:19709400 |
| Whitaker JW et al. | The transferome of metabolic genes explored: analysis of the horizontal transfer of enzyme encoding genes in unicellular eukaryotes. | 2009 | Genome Biol. | pmid:19368726 |