Dimethylallyl pyrophosphate

Dimethylallyl pyrophosphate is a lipid of Prenol Lipids (PR) class. Dimethylallyl pyrophosphate is associated with abnormalities such as Consumption-archaic term for TB and Wiskott-Aldrich Syndrome. The involved functions are known as Anabolism, Biochemical Pathway, Oxidation, Process and Chelating Activity [MoA]. Dimethylallyl pyrophosphate often locates in Chloroplasts, Plastids, chloroplast stroma, Cytosol and Cell membrane. The associated genes with Dimethylallyl pyrophosphate are IRF6 wt Allele and ADRBK1 gene. The related lipids are Sterols.

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Introduction

To understand associated biological information of Dimethylallyl pyrophosphate, we collected biological information of abnormalities, associated pathways, cellular/molecular locations, biological functions, related genes/proteins, lipids and common seen animal/experimental models with organized paragraphs from literatures.

What diseases are associated with Dimethylallyl pyrophosphate?

Dimethylallyl pyrophosphate is suspected in and other diseases in descending order of the highest number of associated sentences.

Related references are mostly published in these journals:

Disease Cross reference Weighted score Related literature
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Possible diseases from mapped MeSH terms on references

We collected disease MeSH terms mapped to the references associated with Dimethylallyl pyrophosphate

MeSH term MeSH ID Detail
Melanoma D008545 69 associated lipids
Total 1

PubChem Associated disorders and diseases

What pathways are associated with Dimethylallyl pyrophosphate

Lipid pathways are not clear in current pathway databases. We organized associated pathways with Dimethylallyl pyrophosphate through full-text articles, including metabolic pathways or pathways of biological mechanisms.

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PubChem Biomolecular Interactions and Pathways

Link to PubChem Biomolecular Interactions and Pathways

What cellular locations are associated with Dimethylallyl pyrophosphate?

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What functions are associated with Dimethylallyl pyrophosphate?


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What lipids are associated with Dimethylallyl pyrophosphate?

Related references are published most in these journals:

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What genes are associated with Dimethylallyl pyrophosphate?

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Gene Cross reference Weighted score Related literatures

What common seen animal models are associated with Dimethylallyl pyrophosphate?

There are no associated biomedical information in the current reference collection.

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All references with Dimethylallyl pyrophosphate

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Authors Title Published Journal PubMed Link
Barkley SJ et al. Proton exchange in type II isopentenyl diphosphate isomerase. 2004 Org. Lett. pmid:15606125
pmid:15608374
pmid:15649510
pmid:15650872
Sharkey TD et al. Evolution of the isoprene biosynthetic pathway in kudzu. 2005 Plant Physiol. pmid:15653811
Guevara-García A et al. Characterization of the Arabidopsis clb6 mutant illustrates the importance of posttranscriptional regulation of the methyl-D-erythritol 4-phosphate pathway. 2005 Plant Cell pmid:15659625
Guo RT et al. Crystal structures of undecaprenyl pyrophosphate synthase in complex with magnesium, isopentenyl pyrophosphate, and farnesyl thiopyrophosphate: roles of the metal ion and conserved residues in catalysis. 2005 J. Biol. Chem. pmid:15788389
Fujisaki S et al. Disruption of the structural gene for farnesyl diphosphate synthase in Escherichia coli. 2005 J. Biochem. pmid:15809342
Szkopińska A and Płochocka D Farnesyl diphosphate synthase; regulation of product specificity. 2005 Acta Biochim. Pol. pmid:15827605
Margl L et al. Biosynthesis of benzofuran derivatives in root cultures of Tagetes patula via phenylalanine and 1-deoxy-D-xylulose 5-phosphate. 2005 Phytochemistry pmid:15845407
Smith AS and Smid SD Impaired capsaicin and neurokinin-evoked colonic motility in inflammatory bowel disease. 2005 J. Gastroenterol. Hepatol. pmid:15853981
pmid:15870460
pmid:15882994
Maurer-Stroh S and Eisenhaber F Refinement and prediction of protein prenylation motifs. 2005 Genome Biol. pmid:15960807
pmid:16000710
Sabehi G et al. New insights into metabolic properties of marine bacteria encoding proteorhodopsins. 2005 PLoS Biol. pmid:16008504
Rohdich F et al. Isoprenoid biosynthetic pathways as anti-infective drug targets. 2005 Biochem. Soc. Trans. pmid:16042599
pmid:16052321
pmid:16098785
Mayrhofer S et al. Diurnal and seasonal variation of isoprene biosynthesis-related genes in grey poplar leaves. 2005 Plant Physiol. pmid:16126852
pmid:16143290
pmid:16203191
pmid:16231155
Ku B et al. Preparation, characterization, and optimization of an in vitro C30 carotenoid pathway. 2005 Appl. Environ. Microbiol. pmid:16269684
pmid:16288456
pmid:16289312
pmid:16297849
Kao CL et al. Stereochemical analysis of isopentenyl diphosphate isomerase type II from Staphylococcus aureus using chemically synthesized (S)- and (R)-[2-2H]isopentenyl diphosphates. 2005 Org. Lett. pmid:16321020
Wu Z et al. Isopentenyl diphosphate isomerase. Mechanism-based inhibition by diene analogues of isopentenyl diphosphate and dimethylallyl diphosphate. 2005 J. Am. Chem. Soc. pmid:16332094
pmid:16397874
Brück TB and Kerr RG Purification and kinetic properties of elisabethatriene synthase from the coral Pseudopterogorgia elisabethae. 2006 Comp. Biochem. Physiol. B, Biochem. Mol. Biol. pmid:16423548
Nogués I et al. Dimethylallyl diphosphate and geranyl diphosphate pools of plant species characterized by different isoprenoid emissions. 2006 Plant Physiol. pmid:16461390
Thulasiram HV et al. Synthesis of deuterium-labeled derivatives of dimethylallyl diphosphate. 2006 J. Org. Chem. pmid:16468838
Song L A soluble form of phosphatase in Saccharomyces cerevisiae capable of converting farnesyl diphosphate into E,E-farnesol. 2006 Appl. Biochem. Biotechnol. pmid:16484724
Benetka W et al. Farnesylation or geranylgeranylation? Efficient assays for testing protein prenylation in vitro and in vivo. 2006 BMC Biochem. pmid:16507103
Yoon SH et al. Enhanced lycopene production in Escherichia coli engineered to synthesize isopentenyl diphosphate and dimethylallyl diphosphate from mevalonate. 2006 Biotechnol. Bioeng. pmid:16547999
Cervantes-Cervantes M et al. Maize cDNAs expressed in endosperm encode functional farnesyl diphosphate synthase with geranylgeranyl diphosphate synthase activity. 2006 Plant Physiol. pmid:16581875
Manzano D et al. Overexpression of farnesyl diphosphate synthase in Arabidopsis mitochondria triggers light-dependent lesion formation and alters cytokinin homeostasis. 2006 Plant Mol. Biol. pmid:16786301
pmid:16793276
Hsiao YY et al. Comparison of transcripts in Phalaenopsis bellina and Phalaenopsis equestris (Orchidaceae) flowers to deduce monoterpene biosynthesis pathway. 2006 BMC Plant Biol. pmid:16836766
pmid:16939278
pmid:16956297
Muñoz-Bertomeu J et al. Up-regulation of 1-deoxy-D-xylulose-5-phosphate synthase enhances production of essential oils in transgenic spike lavender. 2006 Plant Physiol. pmid:16980564
Sen SE et al. Juvenile hormone biosynthesis in M. sexta: substrate specificity of insect prenyltransferase utilizing homologous diphosphate analogs. 2006 Insect Biochem. Mol. Biol. pmid:17046596
Yoon SH et al. Engineering the lycopene synthetic pathway in E. coli by comparison of the carotenoid genes of Pantoea agglomerans and Pantoea ananatis. 2007 Appl. Microbiol. Biotechnol. pmid:17115209
Withers ST and Keasling JD Biosynthesis and engineering of isoprenoid small molecules. 2007 Appl. Microbiol. Biotechnol. pmid:17115212
pmid:17137593
Green S et al. Unusual features of a recombinant apple alpha-farnesene synthase. 2007 Phytochemistry pmid:17140613
Thulasiram HV and Poulter CD Farnesyl diphosphate synthase: the art of compromise between substrate selectivity and stereoselectivity. 2006 J. Am. Chem. Soc. pmid:17147392
pmid:17175444
Kloer DP et al. Structure and reaction geometry of geranylgeranyl diphosphate synthase from Sinapis alba. 2006 Biochemistry pmid:17176041
Laupitz R et al. Stereochemical studies on the making and unmaking of isopentenyl diphosphate in different biological systems. 2004 Chem. Biodivers. pmid:17191914
pmid:17250851
pmid:17257214
Amslinger S et al. Stimulation of Vgamma9/Vdelta2 T-lymphocyte proliferation by the isoprenoid precursor, (E)-1-hydroxy-2-methyl-but-2-enyl 4-diphosphate. 2007 Immunobiology pmid:17270709
pmid:17291279
Xie W et al. Structure of tRNA dimethylallyltransferase: RNA modification through a channel. 2007 J. Mol. Biol. pmid:17292915
pmid:17320045
Omoigui S The Interleukin-6 inflammation pathway from cholesterol to aging--role of statins, bisphosphonates and plant polyphenols in aging and age-related diseases. 2007 Immun Ageing pmid:17374166
Scott E et al. Biomass in the manufacture of industrial products--the use of proteins and amino acids. 2007 Appl. Microbiol. Biotechnol. pmid:17387469
Sgraja T et al. Structure, substrate recognition and reactivity of Leishmania major mevalonate kinase. 2007 BMC Struct. Biol. pmid:17397541
Christianson DW Chemistry. Roots of biosynthetic diversity. 2007 Science pmid:17412944
Rothman SC et al. Kinetic and spectroscopic characterization of type II isopentenyl diphosphate isomerase from Thermus thermophilus: evidence for formation of substrate-induced flavin species. 2007 Biochemistry pmid:17428035
Perrin RM et al. Transcriptional regulation of chemical diversity in Aspergillus fumigatus by LaeA. 2007 PLoS Pathog. pmid:17432932
Julsing MK et al. Functional analysis of genes involved in the biosynthesis of isoprene in Bacillus subtilis. 2007 Appl. Microbiol. Biotechnol. pmid:17458547
Loivamäki M et al. Arabidopsis, a model to study biological functions of isoprene emission? 2007 Plant Physiol. pmid:17468218
Glickman JF and Schmid A Farnesyl pyrophosphate synthase: real-time kinetics and inhibition by nitrogen-containing bisphosphonates in a scintillation assay. 2007 Assay Drug Dev Technol pmid:17477829
Yoon SH et al. Increased beta-carotene production in recombinant Escherichia coli harboring an engineered isoprenoid precursor pathway with mevalonate addition. 2007 May-Jun Biotechnol. Prog. pmid:17500531
Walsh CT Revealing coupling patterns in isoprenoid alkylation biocatalysis. 2007 ACS Chem. Biol. pmid:17518430
Yin WB et al. CdpNPT, an N-prenyltransferase from Aspergillus fumigatus: overproduction, purification and biochemical characterisation. 2007 Chembiochem pmid:17525915
Johnston JB et al. Type-2 isopentenyl diphosphate isomerase. Mechanistic studies with cyclopropyl and epoxy analogues. 2007 J. Am. Chem. Soc. pmid:17547410
Cassera MB et al. Effect of fosmidomycin on metabolic and transcript profiles of the methylerythritol phosphate pathway in Plasmodium falciparum. 2007 Mem. Inst. Oswaldo Cruz pmid:17568945
pmid:17577899
Grimplet J et al. Tissue-specific mRNA expression profiling in grape berry tissues. 2007 BMC Genomics pmid:17584945
Kittleman W et al. Characterization and mechanistic studies of type II isopentenyl diphosphate:dimethylallyl diphosphate isomerase from Staphylococcus aureus. 2007 Biochemistry pmid:17585782
Behnke K et al. Transgenic, non-isoprene emitting poplars don't like it hot. 2007 Plant J. pmid:17587235
pmid:17628280
Saito K et al. Short-chain prenyl diphosphate synthase that condenses isopentenyl diphosphate with dimethylallyl diphosphate in ispA null Escherichia coli strain lacking farnesyl diphosphate synthase. 2007 J. Biosci. Bioeng. pmid:17630132
Schmidt A and Gershenzon J Cloning and characterization of two different types of geranyl diphosphate synthases from Norway spruce (Picea abies). 2008 Phytochemistry pmid:17673268
Phillips MA et al. Functional identification and differential expression of 1-deoxy-D-xylulose 5-phosphate synthase in induced terpenoid resin formation of Norway spruce (Picea abies). 2007 Plant Mol. Biol. pmid:17687625
pmid:17763867
Matsumura Y et al. The carboxyl-terminal region of the geranylgeranyl diphosphate synthase is indispensable for the stabilization of the region involved in substrate binding and catalysis. 2007 J. Biochem. pmid:17846065
Kremer A et al. A 7-dimethylallyltryptophan synthase from Aspergillus fumigatus: overproduction, purification and biochemical characterization. 2007 Microbiology (Reading, Engl.) pmid:17906140
Das A et al. An update on microbial carotenoid production: application of recent metabolic engineering tools. 2007 Appl. Microbiol. Biotechnol. pmid:17912511
pmid:17916506
Arimura G et al. Herbivore-induced terpenoid emission in Medicago truncatula: concerted action of jasmonate, ethylene and calcium signaling. 2008 Planta pmid:17924138
Buetow L et al. The structure of Mycobacteria 2C-methyl-D-erythritol-2,4-cyclodiphosphate synthase, an essential enzyme, provides a platform for drug discovery. 2007 BMC Struct. Biol. pmid:17956607
pmid:17963374
Jassbi AR et al. Silencing geranylgeranyl diphosphate synthase in Nicotiana attenuata dramatically impairs resistance to tobacco hornworm. 2008 Plant Physiol. pmid:17965175
Fujiwara S et al. Efficient synthesis of trans-polyisoprene compounds using two thermostable enzymes in an organic-aqueous dual-liquid phase system. 2008 Biochem. Biophys. Res. Commun. pmid:17976371
Moe M et al. Gene expression profiles in testis of pigs with extreme high and low levels of androstenone. 2007 BMC Genomics pmid:17988377
Wiberley AE et al. Regulation of isoprene emission in Populus trichocarpa leaves subjected to changing growth temperature. 2008 Plant Cell Environ. pmid:17996012
pmid:18029206
pmid:18088143
Velasco R et al. A high quality draft consensus sequence of the genome of a heterozygous grapevine variety. 2007 PLoS ONE pmid:18094749
Galichet A et al. Farnesylation directs AtIPT3 subcellular localization and modulates cytokinin biosynthesis in Arabidopsis. 2008 Plant Physiol. pmid:18184738
pmid:18198872
pmid:18211549
Sasaki K et al. Cloning and characterization of naringenin 8-prenyltransferase, a flavonoid-specific prenyltransferase of Sophora flavescens. 2008 Plant Physiol. pmid:18218974
Thibodeaux CJ et al. Evidence for the involvement of acid/base chemistry in the reaction catalyzed by the type II isopentenyl diphosphate/dimethylallyl diphosphate isomerase from Staphylococcus aureus. 2008 Biochemistry pmid:18229948