phytosphingosine

phytosphingosine is a lipid of Sphingolipids (SP) class. Phytosphingosine is associated with abnormalities such as Infection, Nodule, Dehydration, Neuropathy and nervous system disorder. The involved functions are known as Saturated, sphingomyelin synthase activity, Heat-Shock Response, Cell Growth and Apoptosis. Phytosphingosine often locates in Clone, Protoplasm, Mitochondria, soluble and Cytoplasmic matrix. The associated genes with phytosphingosine are SGMS1 gene, BCL2 gene, Chromatin, Homologous Gene and DLEU2 gene. The related lipids are Sphingolipids, inositolphosphorylceramide, Phosphatidylserines, dihydroceramide and Fatty Acids. The related experimental models are Knock-out.

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Introduction

To understand associated biological information of phytosphingosine, we collected biological information of abnormalities, associated pathways, cellular/molecular locations, biological functions, related genes/proteins, lipids and common seen animal/experimental models with organized paragraphs from literatures.

What diseases are associated with phytosphingosine?

phytosphingosine is suspected in Infection, Nodule, Dehydration, Neuropathy, nervous system disorder, Atopic and other diseases in descending order of the highest number of associated sentences.

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No disease MeSH terms mapped to the current reference collection.

PubChem Associated disorders and diseases

What pathways are associated with phytosphingosine

There are no associated biomedical information in the current reference collection.

PubChem Biomolecular Interactions and Pathways

Link to PubChem Biomolecular Interactions and Pathways

What cellular locations are associated with phytosphingosine?

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What functions are associated with phytosphingosine?


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What lipids are associated with phytosphingosine?

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What genes are associated with phytosphingosine?

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What common seen animal models are associated with phytosphingosine?

Knock-out

Knock-out are used in the study 'Role for de novo sphingoid base biosynthesis in the heat-induced transient cell cycle arrest of Saccharomyces cerevisiae.' (Jenkins GM and Hannun YA, 2001) and Knock-out are used in the study 'SVF1 regulates cell survival by affecting sphingolipid metabolism in Saccharomyces cerevisiae.' (Brace JL et al., 2007).

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NCBI Entrez Crosslinks

All references with phytosphingosine

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Authors Title Published Journal PubMed Link
pmid:
Grilley MM and Takemoto JY Assay of the Saccharomyces cerevisiae dihydrosphingosine C-4 hydroxylase. 2000 Meth. Enzymol. pmid:10563305
Chung N and Obeid LM Use of yeast as a model system for studies of sphingolipid metabolism and signaling. 2000 Meth. Enzymol. pmid:10563337
Sharma C et al. Inhibition of Ca2+ release channel (ryanodine receptor) activity by sphingolipid bases: mechanism of action. 2000 Chem. Phys. Lipids pmid:10660207
Bodennec J et al. Purification of free sphingoid bases by solid-phase extraction on weak cation exchanger cartridges. 2000 Anal. Biochem. pmid:10706795
Chung N et al. Sphingolipids signal heat stress-induced ubiquitin-dependent proteolysis. 2000 J. Biol. Chem. pmid:10764732
Azuma H et al. Stereospecific total syntheses of sphingosine and its analogues from L-serine. 2000 J. Org. Chem. pmid:10843643
Zanolari B et al. Sphingoid base synthesis requirement for endocytosis in Saccharomyces cerevisiae. 2000 EMBO J. pmid:10856228
Mao C et al. Cloning and characterization of a Saccharomyces cerevisiae alkaline ceramidase with specificity for dihydroceramide. 2000 J. Biol. Chem. pmid:10900202
Jenkins GM and Hannun YA Role for de novo sphingoid base biosynthesis in the heat-induced transient cell cycle arrest of Saccharomyces cerevisiae. 2001 J. Biol. Chem. pmid:11056159
Merrill AH et al. Analysis of sphingoid bases and sphingoid base 1-phosphates by high-performance liquid chromatography. 2000 Meth. Enzymol. pmid:11070857
Wu WI and Carman GM Kinetic analysis of sphingoid base inhibition of yeast phosphatidate phosphatase. 2000 Meth. Enzymol. pmid:11070885
He L et al. A stereocontrolled, efficient synthetic route to bioactive sphingolipids: synthesis of phytosphingosine and phytoceramides from unsaturated ester precursors via cyclic sulfate intermediates. 2000 J. Org. Chem. pmid:11076624
Ardail D et al. Occurrence of ceramides and neutral glycolipids with unusual long-chain base composition in purified rat liver mitochondria. 2001 FEBS Lett. pmid:11163764
Kang SS et al. Cyclooxygenase-2 inhibitory cerebrosides from phytolaccae radix. 2001 Chem. Pharm. Bull. pmid:11253924
Toledo MS et al. Characterization of cerebrosides from the thermally dimorphic mycopathogen Histoplasma capsulatum: expression of 2-hydroxy fatty N-acyl (E)-Delta(3)-unsaturation correlates with the yeast-mycelium phase transition. 2001 Glycobiology pmid:11287398
Sperling P et al. Functional characterization of sphingolipid C4-hydroxylase genes from Arabidopsis thaliana. 2001 FEBS Lett. pmid:11297741
Yamada K et al. Constituents of holothuroidea. 10. Isolation and structure of a biologically active ganglioside molecular species from the sea cucumber Holothuria leucospilota. 2001 Chem. Pharm. Bull. pmid:11310672
Bauman M et al. Natural zeolite clinoptilolite increases the concentrations of sphingoid bases in the yeast Yarrowia lipolytica. 2001 J. Basic Microbiol. pmid:11314249
Abe M et al. Yeast 1,3-beta-glucan synthase activity is inhibited by phytosphingosine localized to the endoplasmic reticulum. 2001 J. Biol. Chem. pmid:11337502